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Computing filter(b,a,x,zi) using FFTs

I would like to try to compute y=filter(b,a,x,zi) and dy[i]/dx[j] using FFTs rather than in the time domain for possible speedup in a GPU implementation.

I am not sure it's possible, particularly when zi is non-zero. I looked through how scipy.signal.lfilter in scipy and filter in octave are implemented. They are both done directly in the time domain, with scipy using direct form 2 and octave direct form 1 (from looking through code in DLD-FUNCTIONS/filter.cc). I haven't seen anywhere an FFT implementation analogous to fftfilt for FIR filters in MATLAB (i.e. a = [1.]).

I tried doing y = ifft(fft(b) / fft(a) * fft(x)) but this seems to be conceptually wrong. Also, I am not sure how to handle the initial transient zi. Any references, pointer to existing implementation, would be appreciated.

Example code,

impo开发者_开发知识库rt numpy as np
import scipy.signal as sg
import matplotlib.pyplot as plt

# create an IRR lowpass filter
N = 5
b, a = sg.butter(N, .4)
MN = max(len(a), len(b))

# create a random signal to be filtered
T = 100
P = T + MN - 1
x = np.random.randn(T)
zi = np.zeros(MN-1)

# time domain filter
ylf, zo = sg.lfilter(b, a, x, zi=zi)

# frequency domain filter
af = sg.fft(a, P)
bf = sg.fft(b, P)
xf = sg.fft(x, P)
yfft = np.real(sg.ifft(bf/af * xf))[:T]

# error
print np.linalg.norm(yfft - ylf)

# plot, note error is larger at beginning and with larger N
plt.figure(1)
plt.clf()
plt.plot(ylf)
plt.plot(yfft)


You can reduce the error in your existing implementation by replacing P = T + MN - 1 with P = T + 2*MN - 1. This is purely intuitive, but it seems to me that the division of bf and af will require 2*MN terms, due to wraparound.

C.S. Burrus has a pretty terse writeup of how to regard filtering, whether FIR or IIR, in a block oriented way, here. I haven't read it in detail, but I think it gives you the equations you need to implement IIR filtering by convolution, including intermediate states.


I've forgotten what little I knew about FFTs but you could take a look at sedit.py and frequency.py at http://jc.unternet.net/src/ and see if anything there would help.


Try scipy.signal.lfiltic(b, a, y, x=None) to obtain the initial conditions.

Doc text for lfiltic:

Given a linear filter (b,a) and initial conditions on the output y
and the input x, return the inital conditions on the state vector zi
which is used by lfilter to generate the output given the input.

If M=len(b)-1 and N=len(a)-1.  Then, the initial conditions are given
in the vectors x and y as

x = {x[-1],x[-2],...,x[-M]}
y = {y[-1],y[-2],...,y[-N]}

If x is not given, its inital conditions are assumed zero.
If either vector is too short, then zeros are added
  to achieve the proper length.

The output vector zi contains

zi = {z_0[-1], z_1[-1], ..., z_K-1[-1]}  where K=max(M,N).
0

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