R + reshape : variance of columns of a data.frame
I'm using reshape in R to compute aggregate statistics over columns of a data.frame. Here's my data.frame:
> df
a a b b ID
1 1 1 1 1 1
2 2 3 2 3 2
3 3 5 3 5 3
which is just a little test data.frame to try and understand the reshape package. I melt, and then cast, to try and find the mean of the a
s and the b
s:
> melt(df, id = "ID") -> df.m
> cast(df.m, ID ~ variable, fun = mean)
ID a b
1 1 1 1
2 2 2 2
3 3 3 3
Argh! What? Was hoping the mean of c(2,3)
was 2.5 and so on. What's going on? Here's a thing:
> df.m
ID variable value
1 1 a 1
2 2 a 2
3 3 a 3
4 1 a 1
5 2 a 2
6 3 a 开发者_JAVA百科3
7 1 b 1
8 2 b 2
9 3 b 3
10 1 b 1
11 2 b 2
12 3 b 3
what's going on? Where did both my 5
s go? Do I have a very basic misunderstanding going on here? If so: what is it?
This is not a valid data frame because the columns do not have unique names.
I updated my answer here to fix this: R: aggregate columns of a data.frame
Apparently, if your data frame doesn't have unique column names, they won't melt properly.
Edit:
Instead of having column names of a a a b b
, apparently you need to have unique column names for melt()
to work properly. Minimally a.1 a.2 a.3 b.1 b.2
, or something. After using melt()
, your options to get sensible levels for variable
is either to use gsub()
on the levels of variable
to eliminate the disambiguating values, or to use colsplit()
to create two new columns. For the dummy names I just gave, that would look like:
levels(df.m$variable) <- gsub("\\..*", "", levels(df.m$variable))
#or
df.m <- cbind(df.m, colsplit(df.m$variable, split = "\\.", names = c("Measure","N")))
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