Git pull fails with bad pack header error
git pull fails with following error
remote: Counting objects: 146, done.
remote: fatal: unable to create thread: Resource temporarily unavailable
error: git upload-pack: git-pack-objects died with error.
fatal: git upload-pack: aborting due to possible repository corruption on the remote side.
remote: ab开发者_C百科orting due to possible repository corruption on the remote side.
fatal: protocol error: bad pack header
Any Ideas how to pull successfully ?
The lines beginning with remote
are output from git running on the remote system. The error:
fatal: unable to create thread: Resource temporarily unavailable
... strongly suggests that you've run out of memory on the server, which can happen if you have either:
- A repository with lots of large files, which can cause re-packing to take a lot of memory.
- Limited virtual memory - either in general, or just for that account due to the
ulimit
setting
A suggestion here is to limit the amount of memory that packing may take by logging into the remote system (as the user that git runs as) and doing:
git config --global pack.windowMemory "100m"
git config --global pack.packSizeLimit "100m"
git config --global pack.threads "1"
Complementing the @Mark Longair's answer:
I had to run the following commands to fix this issue:
git config --global pack.windowMemory "100m"
git config --global pack.packSizeLimit "100m"
git config --global pack.threads "1"
git config --global pack.deltaCacheSize "512m"
You can see more about these commands in the git documentation git config
.
Warning: if you see this error with Git 2.19.1, this is expected, and documented in git-for-windows/git
issue 1839: "git gc
crashes at 33% of counting objects" (which reports an APPCRASH both for git gc
, but also for git pull
), because of a mutex used in "git pack-objects", which was not correctly initialized and caused "git repack
" to dump core on Windows.
As mentioned in the issue:
It affects more than just
gc
. I hit a variant of it withpull
too:$ git pull remote: Enumerating objects: 3548, done. error: git upload-pack: git-pack-objects died with error. fatremote: aborting due to possible repository corruption on the remote side. al: git uploadf-pack: aborting due to possible repository corruption on the remote side. atal: protocol error: bad pack header
This is fixed in Git 2.20 (Q4 2018).
See commit 34204c8, commit 9308f45, commit ce498e0 (16 Oct 2018) by Johannes Schindelin (dscho
).
(Merged by Junio C Hamano -- gitster
-- in commit 620b00e, 30 Oct 2018)
pack-objects
(mingw): initializepacking_data
mutex in the correct spotIn 9ac3f0e (
pack-objects
: fix performance issues on packing large deltas, 2018-07-22, Git v2.19.0-rc1), a mutex was introduced that is used to guard the call to set the delta size. This commit even added code to initialize it, but at an incorrect spot: ininit_threaded_search()
, while the call tooe_set_delta_size()
(and hence topacking_data_lock()
) can happen in the call chaincheck_object()
<-get_object_details()
<-prepare_pack()
<-cmd_pack_objects()
, which is long before theprepare_pack()
function callsll_find_deltas()
(which initializes the threaded search).Another tell-tale that the mutex was initialized in an incorrect spot is that the function to initialize it lives in builtin/, while the code that uses the mutex is defined in a
libgit.a
header file.
I was able to resolve this using following steps
Step 1. clone using lesser depth
git clone https://your_git_clone_url --depth 3
Step 2. Edit .git/config and add line for develop. This is required as after setting depth I was not able to switch remote branch other than master
[core]
repositoryformatversion = 0
filemode = false
bare = false
logallrefupdates = true
symlinks = false
ignorecase = true
[remote "origin"]
url = https:<your git clone url>
fetch = +refs/heads/master:refs/remotes/origin/master
fetch = +refs/heads/develop:refs/remotes/origin/develop <<--- Add this line
[branch "master"]
remote = origin
merge = refs/heads/master
[branch "develop"]
remote = origin
merge = refs/heads/develop
Step 3: get fetch
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