How to input Array in R
Hello please find below mentioned code. what i want is to add values to my array on the basis of certai开发者_Go百科n condition checks which i want to undertake. if the values are eligible then they should add to array otherwise they should be discarded. hwoever, I am unable to get the required array. Any help in that regard will be of great help. I am a student at University Of Exeter.
Y<-
>NODE_1
[1] GTTGGCCGAGCCCCAGGACGCGTGGTTGTTGAACCAGATCAGGTCCGGGCTCCACTGCACGTAGTCCTC
>NODE_2
[1] CCTCCGGCGGCACCACGGTCGGCGAGGCCCTCAACATCCTG GAGCGCACCGACCTGTCCACCGCGGACAAGGCCGGTTACCT
GCACCGCTACATCGAGGCCAGCCGCATCGCGTTCGCGGACC GCGGGCGCTGGGTCGGCGACCCCGCCTTCGAGGACGTACCG
>NODE_3
[1]GCCCGGCGCCTGGCCGCGGGCGAGTGGGTCGTGGACCTGCGCTCCCGGGTGGCCTTCGCCGCCGGTCACGTCGCCGGG
TCGCTCAACTTCGAGGCCGACGGACAGCTCGCGACCTACCTGGCCTGGCTGATCCCCTGGGGCAGGCCGGTGACGCTG
CTGGCGCACAGTGCCGACGACCTGGCCCGCGCCCAGCGCGAGCTGGCCCGGGTGGGCATCGA
My code is:
Length <- function(a)
{
b<-list()
for ( i in 1: length(a))
{
b[i]<-which(length(a[i])<30, arr.ind = FALSE, useNames = TRUE)
m<- array(b[i])
}
}
k<- Length(Y)
So what i want to do is add only those data to array b from Y whose length is less then 30.
Perhaps I don't see exactly what you are asking for, but you could try the following.
# set up some data
Y <- list()
Y$NODE_1 <- "GTTGGCCGAGCCCCAGG" # truncated to give example < 30
Y$NODE_2 <- "CCTCCGGCGGCACCACGTCGGCGAGGCCCTCAACATCCTGAGCGCACCGACCTGTCCACCGCGGACAAGGCCG"
Y$NODE_3 <- "CCCGGCGCCTGGCCGGGGCGAGTGGGTCGTGGACCTGCGCTCCCGGGTGGCCTTCGCCGCCGGTCACGTCGCC"
Y$NODE_4 <- "GCCCGGCGCCTG" # another example < 30
#
b <- Y[nchar(Y) < 30] # index directly with logical vector
b
$NODE_1
[1] "GTTGGCCGAGCCCCAGG"
$NODE_4
[1] "GCCCGGCGCCTG"
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