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Create matrix out of list with mathematica

I have a problem which I try to solve with mathematica. I am having a list with x and y coordinates from a position measurement (and also with z values of the quantity which was measured at each point). So, my list starts with list={{-762.369,109.998,0.915951},{-772.412,109.993,0.923894},{-777.39, 109.998, 0.918108},...} (x,y,z). Out of some reasons, I have to fill all these x,y, and z-values into a matrix. That would be easy if I have for each y-coordinate the same amount of x-coordinates (lets say 80), then I could use Partition[list,80] which produces a matrix with 80 columns (and some rows whose number is given by the number of y-coordinates with the same value).

Unfortunately, it is not so easy, the number of x-coordinates for each y is not strictly constant, as can be seen from the attached ListPlot.

Create matrix out of list with mathematica

Can anybody give me some suggestions, how I could开发者_StackOverflow fill each point of this plot / each x-y-(and z-) coordinate of my list into a matrix?

To explain better what I want to have, I indicated in the attached picture a matrix. There one can see that almost every point of my plot would fall into a cell of a matrix, only some cells would stay empty. I used in the plot the color red for the points whose x coordinates are ascending in my list and blue for the points whose x coordinate are descending in my list (the positions are measured along a meander line). Perhaps this kind of order can be useful to solve to problem... Here a link to my coordinates, perhaps this helps.

Well, I hope I explained my question well enough. I would appreciate every help much!


The basic idea behind this solution is:

  • all points seem to lie on a lattice, but it's not precisely a square lattice (it's slanted)
  • so let's find the basis vectors of the lattice, then all (most?) points will be approximate integer linear combinations of the basis vectors
  • the integer "coordinates" of the points along the basis vectors will be the matrix indices for the OP's matrix

(The OP emailed me the datafile. It consists of {x,y} point coordinates.)

Read in the data:

data = Import["xy.txt", "Table"];

Find the nearest 4 points to each point, and notice that they lie about distance 5 away both horizontally and vertically:

nf = Nearest[data];

In:= # - data[[100]] & /@ nf[data[[100]], 5]

Out= {{0., 0.}, {-4.995, 0.}, {5.003, 0.001}, {-0.021, 5.003}, {0.204, -4.999}}

ListPlot[nf[data[[100]], 5], PlotStyle -> Red, 
  PlotMarkers -> Automatic, AspectRatio -> Automatic]

Create matrix out of list with mathematica

Generate the difference vectors between close points and keep only those that are about length 5:

vv = Select[
      Join @@ Table[(# - data[[k]] & /@ nf[data[[k]], 5]), {k, 1, Length[data]}], 
      4.9 < Norm[#] < 5.1 &
     ];

Average the vectors out by directions they can point to, and keep two "good" ones (pointing "up" or to the "right").

In:= Mean /@ GatherBy[vv, Round[ArcTan @@ #, 0.25] &]

Out= {{0.0701994, -4.99814}, {-5.00094, 0.000923234}, {5.00061, -4.51807*10^-6},  
      {-4.99907, -0.004153}, {-0.0667469, 4.9983}, {-0.29147, 4.98216}}

In:= {u1, u2} = %[[{3, 5}]]

Out= {{5.00061, -4.51807*10^-6}, {-0.0667469, 4.9983}}

Use one random point as the point of origin, so the coordinates along the basis vectors u1 and u2 will be integers:

translatedData = data[[100]] - # & /@ data;

Let's find the integer coordinates and see how good they are (how far they are from actual integers):

In:= integerIndices = LinearSolve[Transpose[{u1, u2}], #] & /@ translatedData ;

In:= Max[Abs[integerIndices - Round[integerIndices]]]

Out= 0.104237

In:= ListPlot[{integerIndices, Round[integerIndices]}, PlotStyle -> {Black, Red}]

Create matrix out of list with mathematica

All points lie close to the integer approximations.

Offset the integer coordinates so they're all positive and can be used as matrix indices, then gather the elements into a matrix. I put the coordinates in a point object in order not to confuse SparseArray:

offset = Min /@ Transpose[Round[integerIndices]]
offset = {1, 1} - offset

result = 
 SparseArray[
  Thread[(# + offset & /@ Round[integerIndices]) -> point @@@ data]]

result = Normal[result] /. {point -> List, 0 -> Null}

And we finally have a matrix result where each element is a coordinate-pair! (I was sloppy doing 0 -> Null here to mark missing elements: it's important that data contained no exact 0s.)

MatrixForm[result[[1 ;; 10, 1 ;; 5]]]

Create matrix out of list with mathematica

EDIT

Just for fun, let's look at the deviations of points from the precise integer lattice sites:

lattice = #1 u1 + #2 u2 & @@@ Round[integerIndices];

delta = translatedData - lattice;
delta = # - Mean[delta] & /@ delta;

ListVectorPlot[Transpose[{lattice, delta}, {2, 1, 3}], VectorPoints -> 30]

Create matrix out of list with mathematica

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